Publications
![A word cloud of publication titles](../images/wordcloud.png)
2024
![Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature](/images/m_ji2300769f2.png)
Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
The Journal of Immunology
·
01 Mar 2024
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doi:10.4049/jimmunol.2300769
·
PMID: 38426888
·
PMCID: PMC10944819
2023
![DrugMechDB: A Curated Database of Drug Mechanisms](https://media.springernature.com/full/springer-static/image/art%3A10.1038%2Fs41597-023-02534-z/MediaObjects/41597_2023_2534_Fig1_HTML.png)
DrugMechDB: A Curated Database of Drug Mechanisms
Scientific Data
·
16 Sep 2023
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doi:10.1038/s41597-023-02534-z
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PMID: 37717042
·
PMCID: PMC10505144
![BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11015316/bin/btad570f1.jpg)
BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
Bioinformatics
·
01 Sep 2023
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doi:10.1093/bioinformatics/btad570
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PMID: 37707514
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PMCID: PMC11015316
![Association study between drug prescriptions and Alzheimer’s disease claims in a commercial insurance database](https://media.springernature.com/full/springer-static/image/art%3A10.1186%2Fs13195-023-01255-0/MediaObjects/13195_2023_1255_Fig3_HTML.png?as=webp)
Association study between drug prescriptions and Alzheimer’s disease claims in a commercial insurance database
Alzheimer's Research & Therapy
·
24 Jun 2023
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doi:10.1186/s13195-023-01255-0
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PMID: 37355615
·
PMCID: PMC10290352
![Drug Repositioning using Consilience of Knowledge Graph Completion Methods](https://www.biorxiv.org/content/biorxiv/early/2023/12/20/2023.05.12.540594/F1.large.jpg)
Drug Repositioning using Consilience of Knowledge Graph Completion Methods
Cold Spring Harbor Laboratory
·
14 May 2023
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doi:10.1101/2023.05.12.540594
![Schema Playground: a tool for authoring, extending, and using metadata schemas to improve FAIRness of biomedical data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10116472/bin/12859_2023_5258_Fig1_HTML.jpg)
Schema Playground: a tool for authoring, extending, and using metadata schemas to improve FAIRness of biomedical data
BMC Bioinformatics
·
20 Apr 2023
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doi:10.1186/s12859-023-05258-4
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PMID: 37081398
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PMCID: PMC10116472
![An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10603356/bin/S2059866123006192_fig2.jpg)
An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
Journal of Clinical and Translational Science
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01 Jan 2023
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doi:10.1017/cts.2023.619
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PMID: 37900350
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PMCID: PMC10603356
2022
![Progress toward a universal biomedical data translator](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9372428/bin/CTS-15-1838-g002.jpg)
Progress toward a universal biomedical data translator
Clinical and Translational Science
·
06 Jun 2022
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doi:10.1111/cts.13301
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PMID: 35611543
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PMCID: PMC9372428
![Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9372416/bin/CTS-15-1848-g002.jpg)
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science
Clinical and Translational Science
·
06 Jun 2022
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doi:10.1111/cts.13302
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PMID: 36125173
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PMCID: PMC9372416
![Design and application of a knowledge network for automatic prioritization of drug mechanisms](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113361/bin/btac205f3.jpg)
Design and application of a knowledge network for automatic prioritization of drug mechanisms
Bioinformatics
·
06 Apr 2022
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doi:10.1093/bioinformatics/btac205
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PMID: 35561182
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PMCID: PMC9113361
![Quantitative Metaproteomics and Activity-based Protein Profiling of Patient Fecal Microbiome Identifies Host and Microbial Serine-type Endopeptidase Activity Associated With Ulcerative Colitis](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8941213/bin/gr1.jpg)
Quantitative Metaproteomics and Activity-based Protein Profiling of Patient Fecal Microbiome Identifies Host and Microbial Serine-type Endopeptidase Activity Associated With Ulcerative Colitis
Molecular & Cellular Proteomics
·
01 Mar 2022
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doi:10.1016/j.mcpro.2022.100197
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PMID: 35033677
·
PMCID: PMC8941213
![BioThings SDK: a toolkit for building high-performance data APIs in biomedical research](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8963279/bin/btac017f1.jpg)
BioThings SDK: a toolkit for building high-performance data APIs in biomedical research
Bioinformatics
·
10 Jan 2022
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doi:10.1093/bioinformatics/btac017
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PMID: 35020801
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PMCID: PMC8963279
2021
2020
![Mohawk is a transcription factor that promotes meniscus cell phenotype and tissue repair and reduces osteoarthritis severity](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7955769/bin/nihms-1659893-f0003.jpg)
Mohawk is a transcription factor that promotes meniscus cell phenotype and tissue repair and reduces osteoarthritis severity
Science Translational Medicine
·
28 Oct 2020
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doi:10.1126/scitranslmed.aan7967
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PMID: 33115953
·
PMCID: PMC7955769
![Functional Annotation of the Transcriptome of the Pig, Sus scrofa, Based Upon Network Analysis of an RNAseq Transcriptional Atlas](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7034361/bin/fgene-10-01355-g001.jpg)
Functional Annotation of the Transcriptome of the Pig, Sus scrofa, Based Upon Network Analysis of an RNAseq Transcriptional Atlas
Frontiers in Genetics
·
14 Feb 2020
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doi:10.3389/fgene.2019.01355
·
PMID: 32117413
·
PMCID: PMC7034361
2019
![Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907279/bin/12859_2019_3297_Fig3_HTML.jpg)
Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network
BMC Bioinformatics
·
01 Dec 2019
·
doi:10.1186/s12859-019-3297-0
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PMID: 31829175
·
PMCID: PMC6907279
![Applying citizen science to gene, drug and disease relationship extraction from biomedical abstracts](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8104067/bin/bioinformatics_36_4_1226_f1.jpg)
Applying citizen science to gene, drug and disease relationship extraction from biomedical abstracts
Bioinformatics
·
03 Sep 2019
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doi:10.1093/bioinformatics/btz678
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PMID: 31504205
·
PMCID: PMC8104067
![Position β57 of I-A
<sup>g7</sup>
controls early anti-insulin responses in NOD mice, linking an MHC susceptibility allele to type 1 diabetes onset](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6816460/bin/nihms-1055478-f0001.jpg)
Position β57 of I-A
g7
controls early anti-insulin responses in NOD mice, linking an MHC susceptibility allele to type 1 diabetes onset
Science Immunology
·
02 Aug 2019
·
doi:10.1126/sciimmunol.aaw6329
·
PMID: 31471352
·
PMCID: PMC6816460
![Aligning Needs: Integrating Citizen Science Efforts into Schools Through Service Requirements.](/images/csslr.png)
Aligning Needs: Integrating Citizen Science Efforts into Schools Through Service Requirements.
Human Computation
·
02 Jun 2019
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doi:10.15346/hc.v6i1.4
2018
![Using single cell analysis for translational studies in immune mediated diseases: Opportunities and challenges](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258053/bin/nihms-996555-f0003.jpg)
Using single cell analysis for translational studies in immune mediated diseases: Opportunities and challenges
Molecular Immunology
·
01 Nov 2018
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doi:10.1016/j.molimm.2018.09.020
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PMID: 30300798
·
PMCID: PMC6258053
![Identification of transcription factors responsible for dysregulated networks in human osteoarthritis cartilage by global gene expression analysis](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6245598/bin/nihms-992829-f0003.jpg)
Identification of transcription factors responsible for dysregulated networks in human osteoarthritis cartilage by global gene expression analysis
Osteoarthritis and Cartilage
·
01 Nov 2018
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doi:10.1016/j.joca.2018.07.012
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PMID: 30081074
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PMCID: PMC6245598
![Association study of long-term kidney transplant rejection using whole-exome sequencing](https://www.biorxiv.org/content/biorxiv/early/2018/10/16/444497/F1.medium.gif)
Association study of long-term kidney transplant rejection using whole-exome sequencing
Cold Spring Harbor Laboratory
·
16 Oct 2018
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doi:10.1101/444497
![The ReFRAME library as a comprehensive drug repurposing library and its application to the treatment of cryptosporidiosis](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6196526/bin/pnas.1810137115fig02.jpg)
The ReFRAME library as a comprehensive drug repurposing library and its application to the treatment of cryptosporidiosis
Proceedings of the National Academy of Sciences
·
03 Oct 2018
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doi:10.1073/pnas.1810137115
·
PMID: 30282735
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PMCID: PMC6196526
![The Healthy Pregnancy Research Program: transforming pregnancy research through a ResearchKit app](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550256/bin/41746_2018_52_Fig2_HTML.jpg)
The Healthy Pregnancy Research Program: transforming pregnancy research through a ResearchKit app
npj Digital Medicine
·
05 Sep 2018
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doi:10.1038/s41746-018-0052-2
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PMID: 31304325
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PMCID: PMC6550256
![Correcting the F508del-CFTR variant by modulating eukaryotic translation initiation factor 3–mediated translation initiation](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120211/bin/zbc0361892560007.jpg)
Correcting the F508del-CFTR variant by modulating eukaryotic translation initiation factor 3–mediated translation initiation
Journal of Biological Chemistry
·
01 Aug 2018
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doi:10.1074/jbc.RA118.003192
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PMID: 30006345
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PMCID: PMC6120211
![Triflic acid treatment enables LC-MS/MS analysis of insoluble bacterial biomass](https://www.biorxiv.org/content/biorxiv/early/2018/07/11/367599/F5.medium.gif)
Triflic acid treatment enables LC-MS/MS analysis of insoluble bacterial biomass
Cold Spring Harbor Laboratory
·
11 Jul 2018
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doi:10.1101/367599
![Exploring applications of crowdsourcing to cryo-EM](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086358/bin/nihms-976652-f0004.jpg)
Exploring applications of crowdsourcing to cryo-EM
Journal of Structural Biology
·
01 Jul 2018
·
doi:10.1016/j.jsb.2018.02.006
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PMID: 29486249
·
PMCID: PMC6086358
![FoxO transcription factors modulate autophagy and proteoglycan 4 in cartilage homeostasis and osteoarthritis](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6204214/bin/nihms-992825-f0008.jpg)
FoxO transcription factors modulate autophagy and proteoglycan 4 in cartilage homeostasis and osteoarthritis
Science Translational Medicine
·
14 Feb 2018
·
doi:10.1126/scitranslmed.aan0746
·
PMID: 29444976
·
PMCID: PMC6204214
![Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796402/bin/12859_2018_2041_Fig3_HTML.jpg)
Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration
BMC Bioinformatics
·
01 Feb 2018
·
doi:10.1186/s12859-018-2041-5
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PMID: 29390967
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PMCID: PMC5796402
2017
![Science Game Lab: tool for the unification of biomedical games with a purpose](https://www.biorxiv.org/content/biorxiv/early/2017/07/10/156141/F1.medium.gif)
Science Game Lab: tool for the unification of biomedical games with a purpose
Cold Spring Harbor Laboratory
·
10 Jul 2017
·
doi:10.1101/156141
![Dysregulated circadian rhythm pathway in human osteoarthritis: NR1D1 and BMAL1 suppression alters TGF-β signaling in chondrocytes](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5438901/bin/nihms853698f4.jpg)
Dysregulated circadian rhythm pathway in human osteoarthritis: NR1D1 and BMAL1 suppression alters TGF-β signaling in chondrocytes
Osteoarthritis and Cartilage
·
01 Jun 2017
·
doi:10.1016/j.joca.2016.11.007
·
PMID: 27884645
·
PMCID: PMC5438901
![EXPLANe: An Extensible Framework for Poster Annotation with Mobile Devices](https://www.biorxiv.org/content/biorxiv/early/2017/03/29/121178/F1.medium.gif)
EXPLANe: An Extensible Framework for Poster Annotation with Mobile Devices
Cold Spring Harbor Laboratory
·
29 Mar 2017
·
doi:10.1101/121178
![Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5441882/bin/nihms857524f2.jpg)
Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease
Journal of Proteome Research
·
23 Jan 2017
·
doi:10.1021/acs.jproteome.6b00938
·
PMID: 28052195
·
PMCID: PMC5441882
2016
![Citizen Science for Mining the Biomedical Literature](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6226017/bin/nihms-992547-f0001.jpg)
Citizen Science for Mining the Biomedical Literature
Citizen Science: Theory and Practice
·
31 Dec 2016
·
doi:10.5334/cstp.56
·
PMID: 30416754
·
PMCID: PMC6226017
![Suppression of REDD1 in osteoarthritis cartilage, a novel mechanism for dysregulated mTOR signaling and defective autophagy](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4992644/bin/nihms791169f6.jpg)
Suppression of REDD1 in osteoarthritis cartilage, a novel mechanism for dysregulated mTOR signaling and defective autophagy
Osteoarthritis and Cartilage
·
01 Sep 2016
·
doi:10.1016/j.joca.2016.04.015
·
PMID: 27118398
·
PMCID: PMC4992644
![Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120959/bin/nihms-827833-f0002.jpg)
Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems
Journal of Proteome Research
·
19 Jul 2016
·
doi:10.1021/acs.jproteome.6b00095
·
PMID: 27356587
·
PMCID: PMC5120959
![Gene Expression in Biopsies of Acute Rejection and Interstitial Fibrosis/Tubular Atrophy Reveals Highly Shared Mechanisms That Correlate With Worse Long‐Term Outcomes](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5501990/bin/nihms870079f3.jpg)
Gene Expression in Biopsies of Acute Rejection and Interstitial Fibrosis/Tubular Atrophy Reveals Highly Shared Mechanisms That Correlate With Worse Long‐Term Outcomes
American Journal of Transplantation
·
01 Jul 2016
·
doi:10.1111/ajt.13728
·
PMID: 26990570
·
PMCID: PMC5501990
![YY1 plays an essential role at all stages of B-cell differentiation](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941496/bin/pnas.1606297113fig01.jpg)
YY1 plays an essential role at all stages of B-cell differentiation
Proceedings of the National Academy of Sciences
·
22 Jun 2016
·
doi:10.1073/pnas.1606297113
·
PMID: 27335461
·
PMCID: PMC4941496
![Extending gene ontology in the context of extracellular RNA and vesicle communication](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4830068/bin/13326_2016_61_Fig1_HTML.jpg)
Extending gene ontology in the context of extracellular RNA and vesicle communication
Journal of Biomedical Semantics
·
12 Apr 2016
·
doi:10.1186/s13326-016-0061-5
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PMID: 27076901
·
PMCID: PMC4830068
![Branch: an interactive, web-based tool for testing hypotheses and developing predictive models](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4920125/bin/btw117f1p.jpg)
Branch: an interactive, web-based tool for testing hypotheses and developing predictive models
Bioinformatics
·
07 Mar 2016
·
doi:10.1093/bioinformatics/btw117
·
PMID: 27153723
·
PMCID: PMC4920125
2015
Prioritizing Proteomics Assay Development for Clinical Translation
Journal of the American College of Cardiology
·
01 Jul 2015
·
doi:10.1016/j.jacc.2015.04.072
·
PMID: 26160638
![OncoRep: an n-of-1 reporting tool to support genome-guided treatment for breast cancer patients using RNA-sequencing](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494802/bin/12920_2015_95_Fig1_HTML.jpg)
OncoRep: an n-of-1 reporting tool to support genome-guided treatment for breast cancer patients using RNA-sequencing
BMC Medical Genomics
·
21 May 2015
·
doi:10.1186/s12920-015-0095-z
·
PMID: 25989980
·
PMCID: PMC4494802
![The nicotinic α6 subunit gene determines variability in chronic pain sensitivity via cross-inhibition of P2X2/3 receptors](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018401/bin/nihms814673f1.jpg)
The nicotinic α6 subunit gene determines variability in chronic pain sensitivity via cross-inhibition of P2X2/3 receptors
Science Translational Medicine
·
13 May 2015
·
doi:10.1126/scitranslmed.3009986
·
PMID: 25972004
·
PMCID: PMC5018401
![Crowdsourcing in biomedicine: challenges and opportunities](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4719068/bin/bbv021f1p.jpg)
Crowdsourcing in biomedicine: challenges and opportunities
Briefings in Bioinformatics
·
17 Apr 2015
·
doi:10.1093/bib/bbv021
·
PMID: 25888696
·
PMCID: PMC4719068
![Harnessing the Heart of Big Data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4721634/bin/nihms664252f2.jpg)
Harnessing the Heart of Big Data
Circulation Research
·
27 Mar 2015
·
doi:10.1161/CIRCRESAHA.115.306013
·
PMID: 25814682
·
PMCID: PMC4721634
![Omics Pipe: a community-based framework for reproducible multi-omics data analysis](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4443682/bin/btv061f1p.jpg)
Omics Pipe: a community-based framework for reproducible multi-omics data analysis
Bioinformatics
·
30 Jan 2015
·
doi:10.1093/bioinformatics/btv061
·
PMID: 25637560
·
PMCID: PMC4443682
![Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4553261/bin/JEV-4-27497-g001.jpg)
Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies
Journal of Extracellular Vesicles
·
01 Jan 2015
·
doi:10.3402/jev.v4.27497
·
PMID: 26320941
·
PMCID: PMC4553261
2014
MICROTASK CROWDSOURCING FOR DISEASE MENTION ANNOTATION IN PUBMED ABSTRACTS
Biocomputing 2015
·
01 Nov 2014
·
doi:10.1142/9789814644730_0028
CROWDSOURCING AND MINING CROWD DATA
Biocomputing 2015
·
01 Nov 2014
·
doi:10.1142/9789814644730_0026
![Oxidative Stress Diverts tRNA Synthetase to Nucleus for Protection against DNA Damage](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4224670/bin/nihms626748f4.jpg)
Oxidative Stress Diverts tRNA Synthetase to Nucleus for Protection against DNA Damage
Molecular Cell
·
01 Oct 2014
·
doi:10.1016/j.molcel.2014.09.006
·
PMID: 25284223
·
PMCID: PMC4224670
![MyGene.info: gene annotation query as a service](https://www.biorxiv.org/content/biorxiv/early/2014/09/17/009332/F1.medium.gif)
MyGene.info: gene annotation query as a service
Cold Spring Harbor Laboratory
·
18 Sep 2014
·
doi:10.1101/009332
![Functional expression of dental plaque microbiota](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4132376/bin/fcimb-04-00108-g0005.jpg)
Functional expression of dental plaque microbiota
Frontiers in Cellular and Infection Microbiology
·
14 Aug 2014
·
doi:10.3389/fcimb.2014.00108
·
PMID: 25177549
·
PMCID: PMC4132376
2013
Ten Simple Rules for Cultivating Open Science and Collaborative R&D
PLoS Computational Biology
·
26 Sep 2013
·
doi:10.1371/journal.pcbi.1003244
·
PMID: 24086123
·
PMCID: PMC3784487
![Deep Sequencing of the Murine <i>Igh</i> Repertoire Reveals Complex Regulation of Nonrandom V Gene Rearrangement Frequencies](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3778908/bin/nihms509554f1.jpg)
Deep Sequencing of the Murine Igh Repertoire Reveals Complex Regulation of Nonrandom V Gene Rearrangement Frequencies
The Journal of Immunology
·
01 Sep 2013
·
doi:10.4049/jimmunol.1301279
·
PMID: 23898036
·
PMCID: PMC3778908
![Unifying model for molecular determinants of the preselection Vβ repertoire](https://www.pnas.org/cms/10.1073/pnas.1304048110/asset/acdfc533-3d1b-4ac1-b950-5785d2556400/assets/graphic/pnas.1304048110fig01.jpeg)
Unifying model for molecular determinants of the preselection Vβ repertoire
Proceedings of the National Academy of Sciences
·
05 Aug 2013
·
doi:10.1073/pnas.1304048110
·
PMID: 23918392
·
PMCID: PMC3752219
![Crowdsourcing for bioinformatics](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3722523/bin/btt333f1p.jpg)
Crowdsourcing for bioinformatics
Bioinformatics
·
19 Jun 2013
·
doi:10.1093/bioinformatics/btt333
·
PMID: 23782614
·
PMCID: PMC3722523
![A task-based approach for Gene Ontology evaluation](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633003/bin/2041-1480-4-S1-S4-2.jpg)
A task-based approach for Gene Ontology evaluation
Journal of Biomedical Semantics
·
01 Apr 2013
·
doi:10.1186/2041-1480-4-S1-S4
·
PMID: 23734599
·
PMCID: PMC3633003
2012
genegames.org: High-Throughput Access to Biological Knowledge and Reasoning through Online Games
2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology
·
01 Sep 2012
·
doi:10.1109/HISB.2012.70
![Linking genes to diseases with a SNPedia-Gene Wiki mashup](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337266/bin/2041-1480-3-S1-S6-1.jpg)
Linking genes to diseases with a SNPedia-Gene Wiki mashup
Journal of Biomedical Semantics
·
24 Apr 2012
·
doi:10.1186/2041-1480-3-S1-S6
·
PMID: 22541597
·
PMCID: PMC3337266
2011
![TCLUST: A Fast Method for Clustering Genome-Scale Expression Data](/images/tclust.png)
TCLUST: A Fast Method for Clustering Genome-Scale Expression Data
IEEE/ACM Transactions on Computational Biology and Bioinformatics
·
01 May 2011
·
doi:10.1109/TCBB.2010.34
·
PMID: 20479508
2010
![Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2840467/bin/pnas.0914019107fig01.jpg)
Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency
Proceedings of the National Academy of Sciences
·
23 Feb 2010
·
doi:10.1073/pnas.0914019107
·
PMID: 20133595
·
PMCID: PMC2840467
2009
2008
2007
2006
![Reply to “Normalization procedures and detection of linkage signal in genetical-genomics experiments”](https://media.springernature.com/lw685/springer-static/image/art%3A10.1038%2Fng0806-856/MediaObjects/41588_2006_Article_BFng0806856_Fig1_HTML.gif?as=webp)
Reply to “Normalization procedures and detection of linkage signal in genetical-genomics experiments”
Nature Genetics
·
01 Aug 2006
·
doi:10.1038/ng0806-856
![An efficient rapid system for profiling the cellular activities of molecular libraries](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1413928/bin/zpq0070612810004.jpg)
An efficient rapid system for profiling the cellular activities of molecular libraries
Proceedings of the National Academy of Sciences
·
21 Feb 2006
·
doi:10.1073/pnas.0511292103
·
PMID: 16492761
·
PMCID: PMC1413928
2005
![Large-Scale Profiling of Rab GTPase Trafficking Networks: The Membrome](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1182321/bin/zmk0080572610001.jpg)
Large-Scale Profiling of Rab GTPase Trafficking Networks: The Membrome
Molecular Biology of the Cell
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01 Aug 2005
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doi:10.1091/mbc.E05-01-0062
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PMID: 15944222
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PMCID: PMC1182321
2004
2003
Genome-Wide Analysis of CREB Target Genes Reveals A Core Promoter Requirement for cAMP Responsiveness
Molecular Cell
·
01 May 2003
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doi:10.1016/S1097-2765(03)00199-0
2002
![Large Scale Molecular Analysis Identifies Genes with Altered Expression in Salivary Adenoid Cystic Carcinoma](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1867312/bin/jh1023353004.jpg)
Large Scale Molecular Analysis Identifies Genes with Altered Expression in Salivary Adenoid Cystic Carcinoma
The American Journal of Pathology
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01 Oct 2002
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doi:10.1016/S0002-9440(10)64408-2
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PMID: 12368205
·
PMCID: PMC1867312
2001
2000
![Docking molecules by families to increase the diversity of hits in database screens: Computational strategy and experimental evaluation](https://onlinelibrary.wiley.com/cms/asset/fe6a32f8-72c2-41e4-9df8-99107acf8996/mfig003.jpg)
Docking molecules by families to increase the diversity of hits in database screens: Computational strategy and experimental evaluation
Proteins: Structure, Function, and Genetics
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01 Jan 2000
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doi:10.1002/1097-0134(20010201)42:2<279::AID-PROT150>3.0.CO;2-U
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PMID: 11119652