BioGPS Featured Article- Circadian Regulation of Myocardial Sarcomeric Titin-cap (Tcap, Telethonin)

BioGPS has become the valuable resource that it is because of the contributions from our wonderful user community. Thank you for contributing plugins, suggestions, and ideas–all of which have improved BioGPS for everyone. In order to celebrate the contributions of BioGPS users to the scientific research community, this series will feature publications and articles generated by BioGPS...
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Omics Pipe- computational framework for reproducible multi-omics data analysis

As mentioned on Monday, the researchers at the Su lab have been working diligently on a paper to introduce their new computational framework for reproducible multi-omics data analysis.  Advancements in sequencing technologies have made sequencing cheaper and more efficient, but this means that researchers need a way to handle all that data.  Different groups have generated a variety of tools for...
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Only a few days left to submit a manuscript for Pacific Symposium on Biocomputing

The deadline has been extended to Aug 4th which is in less than 5 days! The 2015 Pacific Symposium on Biocomputing will be held from Jan 4-8 on Kohala Coast in Hawaii! Andrew and Ben (together with collaborators Robert and Zhiyong at NCBI) are organizing the session on Crowdsourcing and Mining Crowd Data. For the session to be remotely decent, they need manuscript submissions. Submissions will...
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MyGene.info: we need your support!

It has been almost a year since we released the v2 API of MyGene.info services last July. MyGene.info has grown from an internal service behind BioGPS to a robust, high-performance service provider for anybody to query for up-to-date gene annotation data. Currently, MyGene.info handles ~3 million requests every month, from ~5000 unique IPs. And we are confident that is just a small fraction of...
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Recruiting postdocs in earnest!

There is currently no higher priority for our group right now than recruiting 2-3 new postdoctoral associates to join the lab. We are lucky enough to have very stable funding over the next few years, so these are already-funded positions waiting to be filled ASAP. I have posted two “traditional” job ads here and here, but these are meant to give a flavor of the type of person we are...
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The Network of BioThings

I offer an idea, and a proposal… What: We want to structure biological knowledge by annotating BioThings (genes, proteins, mutations, diseases, and drugs) in biomedical research articles. We want to comprehensively annotate the mentions of these BioThings in research articles, and also want to describe the nature of the relationships between these entities. Finally, we want to do it in...
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