I joined as a Research Programmer in Summer 2020. My interests include data science, biochemistry, immunology, and bioinformatics infrastructure (KGs / data integration, interoperability, and storage / ontologies / reasoning). On off-hours, I tutor, knit, and do yoga.
Education
MS, Bioinformatics and Computational Biomedicine, OHSU
BA, Biology and Chemistry, Northwestern University
Publications
2025
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science
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01 Jul 2025
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doi:10.1111/cts.70284
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PMID: 40635371
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PMCID: PMC12241707
2024
Generating Biomedical Knowledge Graphs from Knowledge Bases, Registries, and Multiomic Data
Cold Spring Harbor Laboratory
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15 Nov 2024
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doi:10.1101/2024.11.14.623648
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PMID: 39605475
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PMCID: PMC11601480
BioThings Explorer: a tool for retrieving custom biomedical knowledge graphs using a federated network of biomedical APIs
F1000 Research Limited
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01 Jan 2024
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doi:10.7490/F1000RESEARCH.1119975.1
2023
BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
Bioinformatics
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01 Sep 2023
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doi:10.1093/bioinformatics/btad570
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PMID: 37707514
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PMCID: PMC11015316
An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
Journal of Clinical and Translational Science
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01 Jan 2023
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doi:10.1017/cts.2023.619
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PMID: 37900350
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PMCID: PMC10603356