Check out the new PanDrugs plugin from @pandrugs_cnio--the clean design neatly and intuitively provides information on drugs that relate to your gene of interest. Thanks to the good folks at Centro Nacional de Investigaciones Oncologicas, this awesome new resource is...
In case you missed the paper on how JSON-LD can be used to link MyGene.info and other BioThings API’s…the paper is as cited below.
Don’t let the use of outdated variant annotations come back and bite you in the face!
Fragmented data in different formats can be quite a nightmare–fortunately there are BioThings APIs
If you love science and enjoy learning, you’re in for a treat! Andrew (the brains behind Mark2Cure) will be holding a webinar using two case studies (the Gene Wiki Project and Mark2Cure) to illustrate the use of crowdsourcing as it applies to knowledge management for translational research. Registeration is free
This Oct. 15-16 event brings together developers, bioinformaticians, pathologists, oncologists, genome scientists & more to tackle precision medicine.
This is part 2 of a blog post describing Wikidata SPARQL query logs. Part 1 is here. In this part, we'll look at the most used items and specifically look at diseases, drugs, genes and proteins. And then look at co-occurrence of properties within queries.. Below is a...
We recently gained access to the anonymised logs of several hundred million SPARQL queries from the Wikidata SPARQL endpoint. This blog post contains some discussion about the main takeaway points, while the full analysis and code can be found here. What are we...
By now, you’ve probably seen the announcement that our renewal grant application has been approved. In addition to funding the improvement of MyGene.info, and the extension of lessons learned from MyVariant.info, the renewal grant will fund the development of a BioThings Software Development Kit (SDK). To our knowledge
We learned a lot from building MyVariant.info to be a fast, RESTful API for gene variant annotation–here’s how we’ll apply what we learned.