What can you build with MyGene/MyVariant annotation services?

Posted by on May 15, 2017 in client, mygene.info, myvariant.info | 0 comments Now that’s how you use MyGene/MyVariant Services--Check out this Jbrowse plugin! One of our pride points for being able to pool, standardize, and share gene and variant annotation data as a service, is that our service is fast! The reason that MyGene.info and MyVariant.info are made with speed in mind is because we want them to be useful to bioinformaticians and tool/resource developers alike!...
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New release: MyGene.info Python client updated to v3.0.0

Posted by on Aug 18, 2016 in BioGPS, client, mygene, mygene.info, mygene.py, newrelease, python | 0 comments A few weeks ago, we released MyGene.info v3 API, which brings changes to exon field data structure and added accession version numbers to refseq and accession fields, along with some other back-compatible changes. Our Python client mygene module is now updated to use our v3 API as the default. We increased its version from v2.3.0 to v3.0.0, just to match the underlying API version. The mygene...
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New release: MyGene.info Python client updated to v2.3.0

Posted by on Jan 14, 2016 in BioGPS, client, mygene, mygene.info, mygene.py, newrelease, python | 0 comments Before the year-end holiday season of 2015, we released a new version of MyGene.info Python client ("mygene" Python module). Here is a summary of the the changes that were made in the new release (v2.3.0), and we encourage all of our users to upgrade to this new version. The upgrade is as easy as one line of command: pip install mygene -U To verify you have the latest version installed: In [1]:...
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myvariantjs: a Node.js client for MyVariant.info

Posted by on Dec 7, 2015 in client, myvariant.info, myvariant.js, nodejs | 0 comments Thanks to the excellent work done by Larry Hengl, we are happy to announce the release of myvariantjs, a Node.js client for MyVariant.info. We have previously released both Python and R clients for MyVariant.info, now Node.js developers have their own native client as well! (Node.js is popular among web developers to build their server-side code in Javascript). To give it a try, simply install...
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MyVariant.info R client in new Bioconductor release

Posted by on Oct 22, 2015 in client, myvariant.info, myvariant.R | 0 comments It's official! We now have an R client for querying MyVariant.info annotation services. The package, myvariant, can be installed from Bioconductor (>v3.2) by running the following commands from your R console: source("http://bioconductor.org/biocLite.R") biocLite("myvariant") Bioconductor provides several packages for seamless interaction with Next Generation Sequencing data. Now, comprehensive...
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MyVariant.info R client in new Bioconductor release

Posted by on Oct 22, 2015 in client, myvariant.info, myvariant.R | 0 comments It's official! We now have an R client for querying MyVariant.info annotation services. The package, myvariant, can be installed from Bioconductor (>v3.2) by running the following commands from your R console: source("http://bioconductor.org/biocLite.R") biocLite("myvariant") Bioconductor provides several packages for seamless interaction with Next Generation Sequencing data. Now, comprehensive...
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