Adam Mark


 


 

Bio

Adam Mark was a graduate student interested in translational informatics/personalized medicine. He joined the Su Lab in January 2014 and worked on developing an R client for MyGene.info annotation and query services. He also worked on MyVariant.info

 

Education

B.S. Biochemistry, San Diego State University
M.S. Biomedical informatics, San Diego State University
 

Publications

R. K. Grover, X. Zhu, T. Nieusma, T. Jones, I. Boero, A. S. MacLeod, A. Mark, S. Niessen, H. J. Kim, L. Kong, N. Assad-Garcia, K. Kwon, M. Chesi, V. V. Smider, D. R. Salomon, D. F. Jelinek, R. A. Kyle, R. B. Pyles, J. I. Glass, A. B. Ward, I. A. Wilson, R. A. Lerner, A structurally distinct human mycoplasma protein that generically blocks antigen-antibody union. Science 343, 656-661 (2014)
 
 


Recent Posts

 


MyVariant.info R client in new Bioconductor release

It's official! We now have an R client for querying MyVariant.info annotation services. The package, myvariant, can be installed from Bioconductor (>v3.2) by running the following commands from your R console: source("http://bioconductor.org/biocLite.R") biocLite("myvariant") Bioconductor provides several packages for seamless interaction with Next Generation Sequencing data. Now, comprehensive...
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MyVariant.info R client in new Bioconductor release

It's official! We now have an R client for querying MyVariant.info annotation services. The package, myvariant, can be installed from Bioconductor (>v3.2) by running the following commands from your R console: source("http://bioconductor.org/biocLite.R") biocLite("myvariant") Bioconductor provides several packages for seamless interaction with Next Generation Sequencing data. Now, comprehensive...
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Introducing mygene R package

As we mentioned in previous post, Bioconductor has accepted mygene, the official MyGene.info R client, and included it in the biannual release on October 14, 2014. MyGene.info provides simple-to-use REST web services to query/retrieve gene annotation data. mygene is a wrapper for accessing MyGene.info services in R. Over the past several months, I have been working on the development of this...
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